knossos-project / knossos

KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural morphology and connectivity.
https://knossos.app
GNU General Public License v2.0
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K doesn‘t load segmentation cubes for pyknossos confs #473

Closed my-tien closed 5 years ago

my-tien commented 5 years ago

was tried with a pyknossos streaming conf.

Optiligence commented 5 years ago

When segmentation is enabled PyK confs get a snappy layer. If you want segmentation cubes in the dataset to be loaded you have to specify a layer for it:

[Dataset 2]
_BaseURL = http://user:user@google.de/foo
_ServerFormat = knossos
_BaseName = experimentname
_Description = "overlay"
_BaseExt = .seg.sz.zip
_DataScale = 9,9,25, 18,18,50, 36,36,100
_Extent = 20480,35328,3840,