knowledgesystems / cmo-pipelines

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CDM Sample List Support #1108

Open averyniceday opened 8 months ago

averyniceday commented 8 months ago

First iteration of supporting Chris' CDM efforts.

cBio samples and relevant data fields are automatically delivered to Chris (either Minio/GitHub). Generated CDM attributes are integrated into solid-heme and all affiliate cohorts. Does not include auto-scheudling/triggering through airflow; timing will need to be discussed and manually tested before being put in prod.