Add Sophia data validation checks to validation_utils_py3 script - Githubissues

knowledgesystems / pipelines-scrum

Repository for tracking uncategorizable issues related to backend pipelines work

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Add Sophia data validation checks to validation_utils_py3 script #1343

Open callachennault opened 2 weeks ago

callachennault commented 2 weeks ago

Done Condition (What do we need? Why do we need it? Keep this is small as possible!)

Add manual checks here (https://mskconfluence.mskcc.org/pages/viewpage.action?spaceKey=CDSI&title=Sophia+Genetics+Pipeline) to validation script and make it a part of the cohort generation process

Technical Description (How are we going to achieve the above)

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