Chai Bandlamudi Jan 16th at 11:05 AM
On biallelic rates for VUS: yes, we can. I update the file on juno with a new column f_biallelic for every variant (in the "signaldb_all_variants_frequencies.txt.gz" file). I also updated the existing f_ballelic column in "signaldb_variants_by_cancertype_summary_statistics.txt.gz" file (there was a minor issue that lead to inflated f_biallelic rates for some variants). the files are in: /juno/work/ccs/bandlamc/shared/signaldb/ .
From signaldb slack channel:
Chai Bandlamudi Jan 16th at 11:05 AM On biallelic rates for VUS: yes, we can. I update the file on juno with a new column f_biallelic for every variant (in the "signaldb_all_variants_frequencies.txt.gz" file). I also updated the existing f_ballelic column in "signaldb_variants_by_cancertype_summary_statistics.txt.gz" file (there was a minor issue that lead to inflated f_biallelic rates for some variants). the files are in: /juno/work/ccs/bandlamc/shared/signaldb/ .