Remove certain annotations for germline mutations

knowledgesystems / signal

Somatic Integration of Germline Alterations in cancer

https://www.signaldb.org/

MIT License

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Remove certain annotations for germline mutations #94

Closed onursumer closed 3 years ago

onursumer commented 3 years ago

Related to #78

Rename Annotation to Somatic Annotation
Remove annotations (except Civic) for germline mutations
Disable sort for annotation column for no. It does not behave as desired when some of the annotations are disabled (see cBioPortal/cbioportal#8247)

onursumer commented 3 years ago

Not sure if sorting annotation column is still useful in this case, probably better to disable it if we don't want to sort, or make it work properly (now if you sort annotation column, the result is not as expect)

@leexgh good point. I think for now we can disable sorting. I will open a separate ticket for the sort issue in cBioPortal repo. That needs to be fixed in the library itself.

onursumer commented 3 years ago

New ticket opened for annotation sort issue: cBioPortal/cbioportal/issues/8247