knowmics-lab / RNAdetector

RNAdetector: a free user-friendly and stand-alone software for RNA-Seq data analysis
https://rnadetector.atlas.dmi.unict.it/index.html
8 stars 8 forks source link

Bump composer/composer from 2.0.9 to 2.0.13 in /WS #12

Closed dependabot[bot] closed 3 years ago

dependabot[bot] commented 3 years ago

Bumps composer/composer from 2.0.9 to 2.0.13.

Release notes

Sourced from composer/composer's releases.

2.0.13

  • Security: Fixed command injection vulnerability in HgDriver/HgDownloader and hardened other VCS drivers and downloaders (GHSA-h5h8-pc6h-jvvx / CVE-2021-29472)
  • Fixed install step at the end of the init command to take new dependencies into account correctly
  • Fixed update --lock listing updates which were not really happening (#9812)
  • Fixed support for --no-dev combined with --locked in outdated and show commands (#9788)

2.0.12

  • Fixed support for new GitHub OAuth token format (#9757)
  • Fixed support for Vagrant/VirtualBox filesystem slowness by adding short sleeps in some places (#9627)
  • Fixed unclear error reporting when a package is in the lock file but not in the remote repositories (#9750)
  • Fixed processes silently ignoring the CWD when it does not exist
  • Fixed new Windows bin handling to avoid proxying phar files (#9742)
  • Fixed issue extracting archives into paths that already exist, fixing problems with some custom installers (composer/installers#479)
  • Fixed support for branch names starting with master/trunk/default (#9739)
  • Fixed self-update to preserve phar file permissions on Windows (#9733)
  • Fixed detection of hg version when localized (#9753)
  • Fixed git execution failures to also include the stdout output (#9720)

2.0.11

  • Reverted "Fixed runtime autoloader registration (for plugins and script handlers) to prefer the project dependencies over the bundled Composer ones" as it caused more problems than expected

2.0.10

  • Added COMPOSER_MAX_PARALLEL_HTTP env var to let people set a lower amount of parallel requests if needed
  • Fixed autoloader registration when plugins are loaded, which may impact plugins relying on this bug (if you use symfony/flex make sure you upgrade it to 1.12.2+ to fix dump-env issues)
  • Fixed exec command suppressing output in some circumstances
  • Fixed Windows/cmd.exe support for script handlers defined as path/to/foo, which are now rewritten internally to path\to\foo when needed
  • Fixed bin handling on Windows for PHP scripts, to more closely match symlinks and allow @php vendor/bin/foo to work cross-platform
  • Fixed Git for Windows/Git Bash not being detected correctly as an interactive shell (regression since 2.0.7)
  • Fixed regression handling some private Bitbucket repository clones
  • Fixed Ctrl-C/SIGINT handling during downloads to correctly abort as soon as possible
  • Fixed runtime autoloader registration (for plugins and script handlers) to prefer the project dependencies over the bundled Composer ones
  • Fixed numeric default branches being aliased as 9999999-dev internally. This alias now only applies to default branches being non-numeric (e.g. dev-main)
  • Fixed support for older lib-sodium versions
  • Fixed various minor issues
Changelog

Sourced from composer/composer's changelog.

[2.0.13] 2021-04-27

  • Security: Fixed command injection vulnerability in HgDriver/HgDownloader and hardened other VCS drivers and downloaders (GHSA-h5h8-pc6h-jvvx / CVE-2021-29472)
  • Fixed install step at the end of the init command to take new dependencies into account correctly
  • Fixed update --lock listing updates which were not really happening (#9812)
  • Fixed support for --no-dev combined with --locked in outdated and show commands (#9788)

[2.0.12] 2021-04-01

  • Fixed support for new GitHub OAuth token format (#9757)
  • Fixed support for Vagrant/VirtualBox filesystem slowness by adding short sleeps in some places (#9627)
  • Fixed unclear error reporting when a package is in the lock file but not in the remote repositories (#9750)
  • Fixed processes silently ignoring the CWD when it does not exist
  • Fixed new Windows bin handling to avoid proxying phar files (#9742)
  • Fixed issue extracting archives into paths that already exist, fixing problems with some custom installers (composer/installers#479)
  • Fixed support for branch names starting with master/trunk/default (#9739)
  • Fixed self-update to preserve phar file permissions on Windows (#9733)
  • Fixed detection of hg version when localized (#9753)
  • Fixed git execution failures to also include the stdout output (#9720)

[2.0.11] 2021-02-24

  • Reverted "Fixed runtime autoloader registration (for plugins and script handlers) to prefer the project dependencies over the bundled Composer ones" as it caused more problems than expected

[2.0.10] 2021-02-23

  • Added COMPOSER_MAX_PARALLEL_HTTP to let people set a lower amount of parallel requests if needed
  • Fixed autoloader registration when plugins are loaded, which may impact plugins relying on this bug (if you use symfony/flex make sure you upgrade it to 1.12.2+ to fix dump-env issues)
  • Fixed exec command suppressing output in some circumstances
  • Fixed Windows/cmd.exe support for script handlers defined as path/to/foo, which are now rewritten internally to path\to\foo when needed
  • Fixed bin handling on Windows for PHP scripts, to more closely match symlinks and allow @php vendor/bin/foo to work cross-platform
  • Fixed Git for Windows/Git Bash not being detected correctly as an interactive shell (regression since 2.0.7)
  • Fixed regression handling some private Bitbucket repository clones
  • Fixed Ctrl-C/SIGINT handling during downloads to correctly abort as soon as possible
  • Fixed runtime autoloader registration (for plugins and script handlers) to prefer the project dependencies over the bundled Composer ones
  • Fixed numeric default branches being aliased as 9999999-dev internally. This alias now only applies to default branches being non-numeric (e.g. dev-main)
  • Fixed support for older lib-sodium versions
  • Fixed various minor issues
Commits


Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself) - `@dependabot use these labels` will set the current labels as the default for future PRs for this repo and language - `@dependabot use these reviewers` will set the current reviewers as the default for future PRs for this repo and language - `@dependabot use these assignees` will set the current assignees as the default for future PRs for this repo and language - `@dependabot use this milestone` will set the current milestone as the default for future PRs for this repo and language You can disable automated security fix PRs for this repo from the [Security Alerts page](https://github.com/alessandrolaferlita/RNAdetector/network/alerts).
dependabot[bot] commented 3 years ago

Looks like composer/composer is up-to-date now, so this is no longer needed.