koadman / proxigenomics

Hi-C analysis of heterogeneous samples
GNU General Public License v2.0
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Permutation control split over both file existence and parameter settings #44

Open cerebis opened 9 years ago

cerebis commented 9 years ago

Currently, a sweep is primarily defined in the config.yaml file, however the codebase also checks for the existence of files (trees and profiles) to include in the sweep.

It would be better if you could control all combinatorics in a single place/domain, or at least filter files down to smaller ranges by pattern matching.