Hello,
I recently read your article: Convergent and complementary selection shaped gains and losses of eusociality in sweat bees. I am using the selection_pipeline.py script to run the command: python /Genomics/kocherlab/berubin/local/developing/selection_pipeline/selection_pipeline.py -b /Genomics/kocherlab/berubin/comparative/halictids/halictid_selection -o halictid -r /Genomics/kocherlab/berubin/comparative/halictids/orthology/orthofinder/protein_seqs/OrthoFinder/Results_Jan29_4/Orthogroups/Orthogroups.txt -t 2 -a write_orthos -d halictids.params. I can not find the halictids.params file in https://github.com/kocherlab/HalictidCompGen/tree/main/homology/protein_coding_alignment. Could you give me any suggestions?
Best wishes!
Na Wan
aewebb80
commented
1 month ago
Hello, I recently read your article: Convergent and complementary selection shaped gains and losses of eusociality in sweat bees. I am using the selection_pipeline.py script to run the command: python /Genomics/kocherlab/berubin/local/developing/selection_pipeline/selection_pipeline.py -b /Genomics/kocherlab/berubin/comparative/halictids/halictid_selection -o halictid -r /Genomics/kocherlab/berubin/comparative/halictids/orthology/orthofinder/protein_seqs/OrthoFinder/Results_Jan29_4/Orthogroups/Orthogroups.txt -t 2 -a write_orthos -d halictids.params. I can not find the halictids.params file in https://github.com/kocherlab/HalictidCompGen/tree/main/homology/protein_coding_alignment. Could you give me any suggestions? Best wishes! Na Wan