kodaim1115 / scMM

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Error in scRNA+scATAC analysis #2

Open adamtongji opened 2 years ago

adamtongji commented 2 years ago

Hi,

Thank you for your great tools for single cell multi-omics analysis. I successfully ran the cite-seq demo but failed to ran our scRNA+scATAC data with following error report:

截屏2022-05-23 下午3 08 45

The input files of our scRNA+scATAC data are formatted same as cite-seq demo data. Could you help us solve the error above?

Thanks! Shaliu

gabumon0 commented 1 year ago

Hi,

Thank you for your great tools for single cell multi-omics analysis. I successfully ran the cite-seq demo but failed to ran our scRNA+scATAC data with following error report:

截屏2022-05-23 下午3 08 45

The input files of our scRNA+scATAC data are formatted same as cite-seq demo data. Could you help us solve the error above?

Thanks! Shaliu

I also encounter the similar problem, I have two rna+atac datasets and one success, one failed; the erroe information as follows:

1677121303222
chyli721-ccnu commented 1 year ago

What an interesting work! I have run into the same problem, I can reproduce the data provided in the tutorial, but when using my own data, I tried two different sets of CITE-seq data and both reported errors. Could you help us solve the error above? Thanks!

9e9439c11be44d2c57f2858e4643eae2