failed attempt to build on mac osx with openmp

[chillydog]

Hi,

I am trying to complile randomForestSRC for use of OpenMP following the instructions at

https://kogalur.github.io/randomForestSRC/building.html

As you can see, below, I have the clang8, fortran 6.1.0, ant 1.10.7, and java 1.8.0 (Mac OS Mojave 10.14.6). The problem appears to be a non-existent directory when attempting ``ant source-cran’’. Perhaps I’ve got the build.xml file in the wrong directory to begin with. Not sure. Advice appreciated. Best, -- Jay

math172m-01:tmp jay$ echo $PATH /usr/local/ant/bin:/usr/local/gfortran/bin:/usr/local/clang8/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin

math172m-01:tmp jay$ clang --version clang version 8.0.0 (tags/RELEASE_800/final) Target: x86_64-apple-darwin18.7.0 Thread model: posix InstalledDir: /usr/local/clang8/bin

math172m-01:tmp jay$ gfortran --version GNU Fortran (GCC) 6.1.0 Copyright (C) 2016 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

math172m-01:tmp jay$ ant -version Apache Ant(TM) version 1.10.7 compiled on September 1 2019

math172m-01:tmp jay$ java -version java version "1.8.0_221" Java(TM) SE Runtime Environment (build 1.8.0_221-b11) Java HotSpot(TM) 64-Bit Server VM (build 25.221-b11, mixed mode)

math172m-01:tmp jay$ ant source-cran Buildfile: /Users/jay/Desktop/tmp/build.xml

init: [echo] --------- randomForestSRC --------- [echo] [echo] Version: 2.9.1 [echo] Build: bld20190708a [echo] [echo] Date: 2019-10-04 [echo] Time: 04:07:42 [echo] [echo] Platform Details: [echo] OS name Mac OS X [echo] OS version 10.14.6 [echo] OS arch x86_64 [echo] Java arch 64

clean-cran: [delete] Deleting directory /Users/jay/Desktop/tmp/target/cran

source-cran: [mkdir] Created dir: /Users/jay/Desktop/tmp/target/cran [mkdir] Created dir: /Users/jay/Desktop/tmp/target/cran/randomForestSRC [mkdir] Created dir: /Users/jay/Desktop/tmp/target/cran/randomForestSRC/inst [mkdir] Created dir: /Users/jay/Desktop/tmp/target/cran/randomForestSRC/data [mkdir] Created dir: /Users/jay/Desktop/tmp/target/cran/randomForestSRC/man [mkdir] Created dir: /Users/jay/Desktop/tmp/target/cran/randomForestSRC/R [mkdir] Created dir: /Users/jay/Desktop/tmp/target/cran/randomForestSRC/src

BUILD FAILED /Users/jay/Desktop/tmp/build.cran.xml:29: /Users/jay/Desktop/tmp/src/main/resources/cran does not exist.

Total time: 0 seconds math172m-01:tmp jay$

[kogalur]

You should check that ~/Desktop/tmp/src exists. It appears you might have corrupted your source directory tree.