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konradjk / exac_browser

Browser for ExAC consortium data
http://exac.broadinstitute.org
MIT License
106 stars 54 forks source link

Error page for variants not found in ExAC #316

Open cgbilancia opened 7 years ago

cgbilancia commented 7 years ago

When searching for specific variants, if the variant is not present in ExAC the use would get a page that stated it was not present and also provided the coverage for that region. This was helpful because you could see if it was a poorly covered region or whether coverage was good and the variant itself has never been seen before. Now there is only an error page when a specific variant is not present in the database.

drsmithdouglas commented 7 years ago

This is definitely an issue. I am working on analysis of several thousand rare variants that fall into this category. GnomAD also had this issue as well for a while, but it was fixed on my request. The same fix should be applied to ExAC.

cgbilancia commented 7 years ago

Thanks for the follow up and all your efforts in maintaining this great resource!

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On Jun 5, 2017, at 8:16 PM, Douglas Smith notifications@github.com<mailto:notifications@github.com> wrote:

This is definitely an issue. I am working on analysis of several thousand rare variants that fall into this category. GnomAD also had this issue as well for a while, but it was fixed on my request. The same fix should be applied to ExAC.

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