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koppor / jabref

Collection of simple for JabRef issues. Please submit PRs to https://github.com/jabRef/jabref/.
https://github.com/jabRef/jabref/
MIT License
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Removing an entry from a group causes exception #567

Closed koppor closed 2 years ago

koppor commented 2 years ago
  1. I had a group with two entries.
  2. I selected the second one
  3. I clicked on "Remove selected entries\ image
  4. The entry was removed
  5. The counter was not updated
  6. The below exception appeared
java.lang.ArrayIndexOutOfBoundsException: arraycopy: length -1 is negative
    at java.base/java.lang.System.arraycopy(Native Method)
    at javafx.base/javafx.collections.transformation.SortedList.removeFromMapping(SortedList.java:364)
    at javafx.base/javafx.collections.transformation.SortedList.addRemove(SortedList.java:398)
    at javafx.base/javafx.collections.transformation.SortedList.sourceChanged(SortedList.java:108)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$Generic.fireValueChangedEvent(ListListenerHelper.java:329)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:482)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.base/javafx.collections.transformation.FilteredList.sourceChanged(FilteredList.java:147)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:485)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at com.tobiasdiez.easybind@2.2/com.tobiasdiez.easybind.MappedBackedList.sourceChanged(MappedBackedList.java:69)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at org.jabref@100.0.0/org.jabref.gui.util.UiThreadList.sourceChanged(UiThreadList.java:23)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.FXCollections$UnmodifiableObservableListImpl.lambda$new$0(FXCollections.java:963)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$Generic.fireValueChangedEvent(ListListenerHelper.java:329)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.FXCollections$SynchronizedObservableList.lambda$new$0(FXCollections.java:1217)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:485)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.base/com.sun.javafx.collections.ObservableListWrapper.access$200(ObservableListWrapper.java:45)
    at javafx.base/com.sun.javafx.collections.ObservableListWrapper$1$1.invalidated(ObservableListWrapper.java:75)
    at javafx.base/com.sun.javafx.collections.MapListenerHelper$Generic.fireValueChangedEvent(MapListenerHelper.java:320)
    at javafx.base/com.sun.javafx.collections.MapListenerHelper.fireValueChangedEvent(MapListenerHelper.java:72)
    at javafx.base/com.sun.javafx.collections.ObservableMapWrapper.callObservers(ObservableMapWrapper.java:115)
    at javafx.base/com.sun.javafx.collections.ObservableMapWrapper.put(ObservableMapWrapper.java:169)
    at org.jabref@100.0.0/org.jabref.model.entry.BibEntry.setField(BibEntry.java:561)
    at org.jabref@100.0.0/org.jabref.model.entry.BibEntry.setField(BibEntry.java:579)
    at org.jabref@100.0.0/org.jabref.gui.entryeditor.SourceTab.storeSource(SourceTab.java:309)
    at org.jabref@100.0.0/org.jabref.gui.entryeditor.SourceTab.bindToEntry(SourceTab.java:239)
    at org.jabref@100.0.0/org.jabref.gui.entryeditor.EntryEditorTab.notifyAboutFocus(EntryEditorTab.java:42)
    at org.jabref@100.0.0/org.jabref.gui.entryeditor.EntryEditor.setEntry(EntryEditor.java:342)
    at java.base/java.util.Optional.ifPresent(Optional.java:178)
    at org.jabref@100.0.0/org.jabref.gui.LibraryTab.lambda$createMainTable$15(LibraryTab.java:492)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$Generic.fireValueChangedEvent(ListListenerHelper.java:329)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:482)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.controls/com.sun.javafx.scene.control.SelectedItemsReadOnlyObservableList.lambda$new$0(SelectedItemsReadOnlyObservableList.java:91)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$Generic.fireValueChangedEvent(ListListenerHelper.java:329)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:482)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.controls/com.sun.javafx.scene.control.ReadOnlyUnbackedObservableList._endChange(ReadOnlyUnbackedObservableList.java:64)
    at javafx.controls/javafx.scene.control.MultipleSelectionModelBase$SelectedIndicesList._endChange(MultipleSelectionModelBase.java:918)
    at javafx.controls/javafx.scene.control.ControlUtils.updateSelectedIndices(ControlUtils.java:208)
    at javafx.controls/javafx.scene.control.TableView$TableViewArrayListSelectionModel.fireCustomSelectedCellsListChangeEvent(TableView.java:3027)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:482)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.base/javafx.collections.transformation.SortedList.sourceChanged(SortedList.java:111)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:482)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.base/javafx.collections.ModifiableObservableListBase.add(ModifiableObservableListBase.java:162)
    at java.base/java.util.AbstractList.add(AbstractList.java:111)
    at javafx.controls/com.sun.javafx.scene.control.SelectedCellsMap.add(SelectedCellsMap.java:118)
    at javafx.controls/javafx.scene.control.TableView$TableViewArrayListSelectionModel.select(TableView.java:2509)
    at javafx.controls/javafx.scene.control.TableView$TableViewArrayListSelectionModel.select(TableView.java:2485)
    at javafx.controls/javafx.scene.control.MultipleSelectionModelBase.shiftSelection(MultipleSelectionModelBase.java:250)
    at javafx.controls/javafx.scene.control.MultipleSelectionModelBase.shiftSelection(MultipleSelectionModelBase.java:196)
    at javafx.controls/javafx.scene.control.TableView$TableViewArrayListSelectionModel.updateSelection(TableView.java:2353)
    at javafx.controls/javafx.scene.control.TableView$TableViewArrayListSelectionModel.lambda$new$2(TableView.java:2214)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$Generic.fireValueChangedEvent(ListListenerHelper.java:329)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:482)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.base/javafx.collections.transformation.SortedList.sourceChanged(SortedList.java:111)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$Generic.fireValueChangedEvent(ListListenerHelper.java:329)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:482)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.base/javafx.collections.transformation.FilteredList.sourceChanged(FilteredList.java:147)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:485)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at com.tobiasdiez.easybind@2.2/com.tobiasdiez.easybind.MappedBackedList.sourceChanged(MappedBackedList.java:69)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at org.jabref@100.0.0/org.jabref.gui.util.UiThreadList.sourceChanged(UiThreadList.java:23)
    at javafx.base/javafx.collections.transformation.TransformationList.lambda$getListener$0(TransformationList.java:106)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.FXCollections$UnmodifiableObservableListImpl.lambda$new$0(FXCollections.java:963)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$Generic.fireValueChangedEvent(ListListenerHelper.java:329)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.FXCollections$SynchronizedObservableList.lambda$new$0(FXCollections.java:1217)
    at javafx.base/javafx.collections.WeakListChangeListener.onChanged(WeakListChangeListener.java:88)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper$SingleChange.fireValueChangedEvent(ListListenerHelper.java:164)
    at javafx.base/com.sun.javafx.collections.ListListenerHelper.fireValueChangedEvent(ListListenerHelper.java:73)
    at javafx.base/javafx.collections.ObservableListBase.fireChange(ObservableListBase.java:239)
    at javafx.base/javafx.collections.ListChangeBuilder.commit(ListChangeBuilder.java:485)
    at javafx.base/javafx.collections.ListChangeBuilder.endChange(ListChangeBuilder.java:541)
    at javafx.base/javafx.collections.ObservableListBase.endChange(ObservableListBase.java:211)
    at javafx.base/com.sun.javafx.collections.ObservableListWrapper.access$200(ObservableListWrapper.java:45)
    at javafx.base/com.sun.javafx.collections.ObservableListWrapper$1$1.invalidated(ObservableListWrapper.java:75)
    at javafx.base/com.sun.javafx.collections.MapListenerHelper$Generic.fireValueChangedEvent(MapListenerHelper.java:320)
    at javafx.base/com.sun.javafx.collections.MapListenerHelper.fireValueChangedEvent(MapListenerHelper.java:72)
    at javafx.base/com.sun.javafx.collections.ObservableMapWrapper.callObservers(ObservableMapWrapper.java:115)
    at javafx.base/com.sun.javafx.collections.ObservableMapWrapper.put(ObservableMapWrapper.java:169)
    at org.jabref@100.0.0/org.jabref.model.entry.BibEntry.setField(BibEntry.java:561)
    at org.jabref@100.0.0/org.jabref.model.entry.BibEntry.setField(BibEntry.java:579)
    at org.jabref@100.0.0/org.jabref.model.groups.WordKeywordGroup.remove(WordKeywordGroup.java:94)
    at org.jabref@100.0.0/org.jabref.model.groups.GroupTreeNode.removeEntriesFromGroup(GroupTreeNode.java:303)
    at org.jabref@100.0.0/org.jabref.gui.groups.GroupTreeViewModel.removeSelectedEntries(GroupTreeViewModel.java:355)
    at org.jabref@100.0.0/org.jabref.gui.groups.GroupTreeView.lambda$createContextMenuForGroup$29(GroupTreeView.java:435)
    at javafx.base/com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(CompositeEventHandler.java:86)
    at javafx.base/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:234)
    at javafx.base/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:191)
    at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:58)
    at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
    at javafx.base/com.sun.javafx.event.EventUtil.fireEventImpl(EventUtil.java:74)
    at javafx.base/com.sun.javafx.event.EventUtil.fireEvent(EventUtil.java:49)
    at javafx.base/javafx.event.Event.fireEvent(Event.java:198)
    at javafx.controls/javafx.scene.control.MenuItem.fire(MenuItem.java:459)
    at javafx.controls/com.sun.javafx.scene.control.ContextMenuContent$MenuItemContainer.doSelect(ContextMenuContent.java:1385)
    at javafx.controls/com.sun.javafx.scene.control.ContextMenuContent$MenuItemContainer.lambda$createChildren$12(ContextMenuContent.java:1338)
    at javafx.base/com.sun.javafx.event.CompositeEventHandler$NormalEventHandlerRecord.handleBubblingEvent(CompositeEventHandler.java:247)
    at javafx.base/com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(CompositeEventHandler.java:80)
    at javafx.base/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:234)
    at javafx.base/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:191)
    at javafx.base/com.sun.javafx.event.CompositeEventDispatcher.dispatchBubblingEvent(CompositeEventDispatcher.java:59)
    at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:58)
    at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
    at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
    at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
    at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
    at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
    at javafx.base/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
    at javafx.base/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
    at javafx.base/com.sun.javafx.event.EventUtil.fireEventImpl(EventUtil.java:74)
    at javafx.base/com.sun.javafx.event.EventUtil.fireEvent(EventUtil.java:54)
    at javafx.base/javafx.event.Event.fireEvent(Event.java:198)
    at javafx.graphics/javafx.scene.Scene$MouseHandler.process(Scene.java:3881)
    at javafx.graphics/javafx.scene.Scene.processMouseEvent(Scene.java:1874)
    at javafx.graphics/javafx.scene.Scene$ScenePeerListener.mouseEvent(Scene.java:2607)
    at javafx.graphics/com.sun.javafx.tk.quantum.GlassViewEventHandler$MouseEventNotification.run(GlassViewEventHandler.java:411)
    at javafx.graphics/com.sun.javafx.tk.quantum.GlassViewEventHandler$MouseEventNotification.run(GlassViewEventHandler.java:301)
    at java.base/java.security.AccessController.doPrivileged(AccessController.java:399)
    at javafx.graphics/com.sun.javafx.tk.quantum.GlassViewEventHandler.lambda$handleMouseEvent$2(GlassViewEventHandler.java:450)
    at javafx.graphics/com.sun.javafx.tk.quantum.QuantumToolkit.runWithoutRenderLock(QuantumToolkit.java:424)
    at javafx.graphics/com.sun.javafx.tk.quantum.GlassViewEventHandler.handleMouseEvent(GlassViewEventHandler.java:449)
    at javafx.graphics/com.sun.glass.ui.View.handleMouseEvent(View.java:551)
    at javafx.graphics/com.sun.glass.ui.View.notifyMouse(View.java:937)
    at javafx.graphics/com.sun.glass.ui.win.WinApplication._runLoop(Native Method)
    at javafx.graphics/com.sun.glass.ui.win.WinApplication.lambda$runLoop$3(WinApplication.java:184)
    at java.base/java.lang.Thread.run(Thread.java:833)
ThiloteE commented 2 years ago

Please try again with newest 5.7 development version with commits newer than 7257350b60427fbd6ee5b6f65641fe912ae8e78a