search

kordastilab / ImmunoCluster

MIT License
27 stars 7 forks source link

Trouble Installing ImmunoCluster #5

Closed ankushs0128 closed 1 year ago

ankushs0128 commented 2 years ago

Trying to Install ImmunoCluster and but for some reason xfun and Nloptr dependencies are not updating resulting in this error.

Any pointers to rectify this problem. 

ERROR: lazy loading failed for package ‘immunoCluster’
* removing ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library/immunoCluster’
Warning message:
In i.p(...) :
  installation of package ‘/var/folders/cl/rt0q_3zj0gdfpqqyf7d9sdjc0000gn/T//Rtmp7Ws1uY/file15cd1278a02b7/immunoCluster_0.1.0.tar.gz’ had non-zero exit status
─ Session info ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
 setting  value
 version  R version 4.1.2 (2021-11-01)
 os       macOS Monterey 12.3
 system   x86_64, darwin17.0
 ui       RStudio
 language (EN)
 collate  en_US.UTF-8
 ctype    en_US.UTF-8
 tz       Europe/Oslo
 date     2022-05-11
 rstudio  2022.02.0+443 Prairie Trillium (desktop)
 pandoc   NA

─ Packages ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
 package     * version date (UTC) lib source
 brio          1.1.3   2021-11-30 [1] CRAN (R 4.1.0)
 cachem        1.0.6   2021-08-19 [1] CRAN (R 4.1.0)
 callr         3.7.0   2021-04-20 [1] CRAN (R 4.1.0)
 cli           3.3.0   2022-04-25 [1] CRAN (R 4.1.2)
 crayon        1.5.1   2022-03-26 [1] CRAN (R 4.1.2)
 curl          4.3.2   2021-06-23 [1] CRAN (R 4.1.0)
 desc          1.4.1   2022-03-06 [1] CRAN (R 4.1.2)
 devtools    * 2.4.3   2021-11-30 [1] CRAN (R 4.1.0)
 ellipsis      0.3.2   2021-04-29 [1] CRAN (R 4.1.0)
 fastmap       1.1.0   2021-01-25 [1] CRAN (R 4.1.0)
 fs            1.5.2   2021-12-08 [1] CRAN (R 4.1.0)
 glue          1.6.2   2022-02-24 [1] CRAN (R 4.1.2)
 lifecycle     1.0.1   2021-09-24 [1] CRAN (R 4.1.0)
 magrittr      2.0.3   2022-03-30 [1] CRAN (R 4.1.2)
 memoise       2.0.1   2021-11-26 [1] CRAN (R 4.1.0)
 pkgbuild      1.3.1   2021-12-20 [1] CRAN (R 4.1.0)
 pkgload       1.2.4   2021-11-30 [1] CRAN (R 4.1.0)
 prettyunits   1.1.1   2020-01-24 [1] CRAN (R 4.1.0)
 processx      3.5.3   2022-03-25 [1] CRAN (R 4.1.2)
 ps            1.7.0   2022-04-23 [1] CRAN (R 4.1.2)
 purrr         0.3.4   2020-04-17 [1] CRAN (R 4.1.0)
 R6            2.5.1   2021-08-19 [1] CRAN (R 4.1.0)
 remotes       2.4.2   2021-11-30 [1] CRAN (R 4.1.0)
 rlang         1.0.2   2022-03-04 [1] CRAN (R 4.1.2)
 rprojroot     2.0.3   2022-04-02 [1] CRAN (R 4.1.2)
 rstudioapi    0.13    2020-11-12 [1] CRAN (R 4.1.0)
 sessioninfo   1.2.2   2021-12-06 [1] CRAN (R 4.1.0)
 testthat      3.1.4   2022-04-26 [1] CRAN (R 4.1.2)
 usethis     * 2.1.5   2021-12-09 [1] CRAN (R 4.1.0)
 withr         2.5.0   2022-03-03 [1] CRAN (R 4.1.2)

 [1] /Library/Frameworks/R.framework/Versions/4.1/Resources/library
JamesOpz commented 2 years ago

Hi,

I just tried an install on a new OSX machine and it appeared to be working alright. It might be an issue with your versions of xfun and Nloptr, I would try uninstalling and reinstalling these individual packages by themselves separately and then try installing ImmunoCluster.

Best, James