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kosta777 / parallel-genomeseq

Parallelization of popular genome sequencing algorithms
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Benchmarking with intel vtune #27

Open huanglangwen opened 4 years ago

huanglangwen commented 4 years ago

Good news, Han and I successfully ran vtune on Leonhard, it is much nicer than I expected! It could produce and analyze detailed profile for openmp, mpi, etc. Here is how to run it:

ssh username@login.leonhard.ethz.ch -X#open X11 forwarding
module load intel/2018.1
which icc
#find the location of intel parallel studio according to icc
#cd into vtune-amplifier/bin
./vtune-gui

We could benchmark our program on it. @hanyao8 @spaceben @kosta777

kosta777 commented 4 years ago

Sounds great, I ll try it soon! Thanks for setting it up.