kosta777 / parallel-genomeseq

Parallelization of popular genome sequencing algorithms
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Notes meeting 02/11 #30

Open spaceben opened 4 years ago

spaceben commented 4 years ago

Questions during presentation

1) Coarse-grained approach

2) Medium-grained approach

3) Fine-grained approach // Cache-inconsistent data structure transformed.

What is the difference between local and global alignment?

Major comments

1) Performance reporting/plots ("statistify")

2) Focus more on related work

3) Define problem boundaries (for example exclude IO from focus)