(check out instaGRAAL for a faster, updated program!) This program is from Marie-Nelly et al., Nature Communications, 2014 (High-quality genome assembly using chromosomal contact data), also Marie-Nelly et al., 2013, PhD thesis (https://www.theses.fr/2013PA066714)
I encountered several problems running the graphical interface. I don't know whether they are version-related, but if my proposals don't crash the tool in your setup, they might be useful for others that have a setup similar to mine.
from PIL import Image instead of import Image
Remove last pipe character | from wcd in OnLoadFasta function in main_window.py
terminal.COLUMNS was None in progressbar.py. I just replaced it with an arbitrary number.
At that point I ran into problems I coulnd't fix as easily.
Hope this is useful to someone
Hi there,
I encountered several problems running the graphical interface. I don't know whether they are version-related, but if my proposals don't crash the tool in your setup, they might be useful for others that have a setup similar to mine.
from PIL import Imageinstead ofimport Image|fromwcdinOnLoadFastafunction in main_window.pyterminal.COLUMNSwas None in progressbar.py. I just replaced it with an arbitrary number.At that point I ran into problems I coulnd't fix as easily. Hope this is useful to someone