How can I get a good fitting effect model

kr-colab / ReLERNN

Recombination Landscape Estimation using Recurrent Neural Networks

MIT License

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How can I get a good fitting effect model #57

Open xingguowu opened 2 weeks ago

xingguowu commented 2 weeks ago

Hello,

I am running ReLERNN to estimate recombination rate of maize genome(85% TE, 2.2 Gb genome size).

No matter how I adjust windowsize, the model of this group(F2，n=180, depth=5x,Sequencing per plant for calling SNP variants and filtered low_qual......) R2 and MAE values are not ideal.

Can you give me some advice？

Thank you very much

xingguowu commented 2 weeks ago

the default parameters were used