kr-colab / greatapes_sims

1 stars 0 forks source link

shifting coordinates in exon tsv #11

Closed mufernando closed 3 years ago

mufernando commented 3 years ago

https://github.com/kr-colab/greatapes_sims/blob/4c9d5481684a8f44b3115ca91b8717be8d71bdc5/scripts/py/chr.snake#L200 you are doing it wrong. the shift should be based on the start coordinate, not the first start of the exon bed file.