krasileva-group / plant_rgenes

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Remove obsolete HMMER -pfamB option. #9

Closed peterjc closed 6 years ago

peterjc commented 6 years ago

This would fix issue #8 where if using HMMER 3, pfam_scan.pl would otherwise abort saying:

FATAL: As of release 28.0, Pfam no longer produces Pfam-B. The -pfamB and -only_pfamB options are now obsolete.