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kreshuklab / plant-seg

A tool for cell instance aware segmentation in densely packed 3D volumetric images
https://kreshuklab.github.io/plant-seg/
MIT License
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No voxel size information on images saved from PlantSeg Napari GUI #203

Closed qin-yu closed 6 months ago

qin-yu commented 6 months ago

I propose to allow selection of reference image that has voxel information, and this information is used on save. This should be an easy solution.

qin-yu commented 6 months ago

Images are in fact saved with such information in "Export stack" widget, but the default saving mechanisms are not overridden. Overriding the default functions for saving may cause problem when PlantSeg is used in combination with other Napari based tools.