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kreshuklab / plant-seg

A tool for cell instance aware segmentation in densely packed 3D volumetric images
https://kreshuklab.github.io/plant-seg/
MIT License
88 stars 31 forks source link

`cudnn` needs to be installed for some systems #206

Closed qin-yu closed 6 months ago

qin-yu commented 6 months ago

On group node at EMBL: Could not load library libcudnn_ops_infer.so.8. Error: libcudnn_ops_infer.so.8: cannot open shared object file: No such file or directory

On Jupyter Hub: no error

To reproduce just install v1.6.6 or some earlier version on group node. I'll put it in the troubleshooting part of docs.

Solution: mamba install -c conda-forge cudnn