extend channel selection

kreshuklab / plant-seg

A tool for cell instance aware segmentation in densely packed 3D volumetric images

https://kreshuklab.github.io/plant-seg/

MIT License

88 stars 31 forks source link

extend channel selection #212

Closed lorenzocerrone closed 5 months ago

lorenzocerrone commented 5 months ago

fix #173
extend channel selection to h5/zarr
streamline open widget (remove advance load and simplify layout selection)
add manual slicing
fix unrelated dask bug

lorenzocerrone commented 5 months ago

Hey @qin-yu, I think this should fix all the issue with the open file widget. About the support for "time" or arbitrary extra dims, I have added the support for manual slicing for "expert users"

qin-yu commented 5 months ago

fix #204

qin-yu commented 5 months ago

Hey @lorenzocerrone I'll run it tomorrow and see.