kreshuklab / plant-seg

A tool for cell instance aware segmentation in densely packed 3D volumetric images
https://kreshuklab.github.io/plant-seg/
MIT License
99 stars 31 forks source link

Proofreading improvements #355

Closed lorenzocerrone closed 1 month ago

lorenzocerrone commented 1 month ago

Unrelated changes:

@qin-yu test it a bit and let me know if the behavior did not change

codecov[bot] commented 1 month ago

Codecov Report

Attention: Patch coverage is 29.18919% with 262 lines in your changes missing coverage. Please review.

Project coverage is 64.81%. Comparing base (d19176e) to head (f8bfe4b). Report is 12 commits behind head on master.

Files with missing lines Patch % Lines
plantseg/viewer_napari/widgets/proofreading.py 27.62% 186 Missing :warning:
plantseg/core/image.py 34.09% 29 Missing :warning:
plantseg/tasks/dataprocessing_tasks.py 17.64% 14 Missing :warning:
plantseg/viewer_napari/widgets/io.py 38.09% 13 Missing :warning:
plantseg/viewer_napari/widgets/prediction.py 33.33% 12 Missing :warning:
plantseg/viewer_napari/widgets/dataprocessing.py 14.28% 6 Missing :warning:
plantseg/viewer_napari/widgets/segmentation.py 0.00% 1 Missing :warning:
plantseg/viewer_napari/widgets/utils.py 50.00% 1 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #355 +/- ## ========================================== - Coverage 66.33% 64.81% -1.52% ========================================== Files 70 70 Lines 4987 5159 +172 ========================================== + Hits 3308 3344 +36 - Misses 1679 1815 +136 ```

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.