Closed jdalino closed 3 years ago
Hello @ksahlin, I worked with NGSpeciesID recently (very nice tool btw) and found that IUPAC code in primer sequences are not recognized. I added a equivalence map in the find_barcode_locations for edlib to consider them as match. Feel free to edit or refuse if you don't want this to be the standard behaviour.
Super thanks for this pull request, very useful! I wanted to wait with the merge until I had fixed the travis automatic build, which is now done.
Add IUPAC equivalence map in find_barcode_locations so edlib can understand IUPAC code as correct match for primer research.