With this, dumpstrobes --seeds genome.fa dumps the sorted randstrobes vector to standard output in a comma-separated format.
Columns:
hash
position
reference index
strobe 2 offset
I also had to move two functions in index.cpp into an anonymous namespace as otherwise the linker complains about a duplicate name (count_randstrobes exists twice).
With this,
dumpstrobes --seeds genome.fa
dumps the sorted randstrobes vector to standard output in a comma-separated format.Columns:
I also had to move two functions in
index.cpp
into an anonymous namespace as otherwise the linker complains about a duplicate name (count_randstrobes
exists twice).