ksahlin / strobealign

Aligns short reads using dynamic seed size with strobemers
MIT License
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Assign multimappers randomly to one of the candidate mapping positions #359

Closed marcelm closed 7 months ago

marcelm commented 7 months ago

(As discussed by e-mail.)

For reads with multiple equally good mapping locations, we currently always pick the first location.

To reduce biases, we should instead pick one of the locations randomly.