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ksahlin / strobealign

Aligns short reads using dynamic seed size with strobemers
MIT License
128 stars 16 forks source link

Baseline comparison CI job passes unexpectedly #361

Closed marcelm closed 7 months ago

marcelm commented 7 months ago

Commit a290e7b from PR #350 changed mapping results slightly, but this was not caught in CI.

For some reason, the input file was empty when strobealign mapped the reads. Then the BAM output was empty and the samdiff.py script apparently succeeds when one of the input files is empty.