implemented mixedstrobes, generalized code, fixed bugs, PEP8/PEP287

ksahlin / strobemers

A repository for generating strobemers and evalaution

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implemented mixedstrobes, generalized code, fixed bugs, PEP8/PEP287 #11

Closed benjamindominikmaier closed 2 years ago

benjamindominikmaier commented 2 years ago

Mixedstrobes is an alternative strobemer protocol which produce a hybrid of strobemers and k-mers seedsusing the hash value of the first strobe. It is possible to produce seeds with different content fractions, e.g., 1/3 kmers and 2/3 strobemers.

ksahlin commented 2 years ago

Amazing work Benjamin!