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ksamuk / pixy

Software for painlessly estimating average nucleotide diversity within and between populations
https://pixy.readthedocs.io/
MIT License
117 stars 14 forks source link

window and step options #50

Closed amsamani closed 2 years ago

amsamani commented 3 years ago

Hi,

I was wondering if pixy has options to use sliding windows.

Thanks.

ksamuk commented 3 years ago

Hi there! Pixy itself doesn't compute sliding windows, but you can specify your own windows (of any configuration) using a bed file.