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ksamuk / pixy

Software for painlessly estimating average nucleotide diversity within and between populations
https://pixy.readthedocs.io/
MIT License
117 stars 14 forks source link

permutation test #53

Closed biozzq closed 1 year ago

biozzq commented 2 years ago

Dear all,

Could permutation test be included in this software? It will be helpful when defining a thresold. Thank you very much.

Best regards, Zheng zhuqing

ksamuk commented 1 year ago

Sorry I missed this issue! This is out of the scope of pixy, but I'd direct you towards the OUTFLANK software, which solves this issue for FST.