Closed LiShuhang-gif closed 2 years ago
Hello!Can you check your chr22.beta.gz file and see if there's any SNPs with a sample size of 0? From the error message, I would bet this is what is causing the issue. If there are SNPs with sample size 0, remove them and try running again.
Hi, I'm trying to calculate B2 using Betascan. However, when I did the last step, I encountered the following error:
The commands I used were basically the same as the tutorials you provided, except that I replaced the file with my own file.
Any suggestions for this error? I'm looking forward to your reply. Thanks in advance!