Closed coopergrace closed 4 years ago
Hello! Sorry for the delay. Github wasn't e-mailing me when people posted github issues, so I missed this. Without more information, it's hard to figure out what could be causing this. If it's still an issue, could you send me a subset of snps.beta.txt.gz that causes this issue, or add the following right before line 602 in the code and tell me what it outputs:
print loc
print B
print type(loc)
print type(B)
-w. You can increase this score
Hi Katie,
I'm having a problem with running BetaScan. My command is:
python BetaScan.py -i snps.beta.txt.gz -fold -o out.betascores.txt
and the error I'm receiving:
Traceback (most recent call last): File "BetaScan.py", line 613, in <module> main() File "BetaScan.py", line 602, in main output.write(str(loc)+"\t"+str(round(B,6))+"\n") #Remove thetas TypeError: a float is required
I'm using Python 2.7.17. I'd appreciate any suggestions you have please.
Cheers