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kstreet13 / slingshot

Functions for identifying and characterizing continuous developmental trajectories in single-cell data.
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Error in brewer_pal("qual", "Set2") #224

Closed apal6 closed 1 year ago

apal6 commented 1 year ago

Hi Kelly,

I am new to using slingshot, and when I tried running the cell_pal function on my data I get the following error. Not sure what's missing.

Error in brewer_pal("qual", "Set2") : could not find function "brewer_pal" Called from: setNames(pal_fun(length(categories), ...), categories)

Thanks, Aastha

kstreet13 commented 1 year ago

Neither the cell_pal nor brewer_pal functions are part of slingshot. The official vignette can be found here: https://bioconductor.org/packages/release/bioc/vignettes/slingshot/inst/doc/vignette.html That's the only one that I maintain and therefore the only one I can guarantee being up-to-date.

apal6 commented 1 year ago

Thank you so much, I will check these out