Closed ktmeaton closed 1 year ago
Note: This depends on duplicate reconciliation (rather than override) from Issue #159.
Clade: Omicron/BA.2/21L,Delta/21I,Omicron/BA.2/21L,Delta/21I Lineage: BA.2*,B.1.617.2*,BA.2.75*,AY.4* Lineage Confidence: 0.712,1.0,0.604,0.702
Omicron/BA.2/21L
Delta/21I
BA.2*
B.1.617.2*
BA.2.75*
AY.4*
0.712
1.0
0.604
0.702
Note: Coverage is needed at position 210, otherwise the first breakpoint won't be detected and will instead be classified as XBC-like.
210
XBC-like
Breakpoint 1: 2791:4183 Breakpoint 2: 22579:22673 Breakpoint 3: 25470:25583
2791:4183
22579:22673
25470:25583
resources/breakpoints.tsv
Parents
Clade:
Omicron/BA.2/21L,Delta/21I,Omicron/BA.2/21L,Delta/21ILineage:BA.2*,B.1.617.2*,BA.2.75*,AY.4*Lineage Confidence:0.712,1.0,0.604,0.702Alleles
Breakpoints
Breakpoint 1:
2791:4183Breakpoint 2:22579:22673Breakpoint 3:25470:25583Tasks
resources/breakpoints.tsvUpdated