Fixed a few small bugs, and updated output part. - Githubissues

ktrns / scrnaseq

Workflow for single-cell RNA-seq analysis using Seurat

MIT License

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Fixed a few small bugs, and updated output part. #85

Closed ktrns closed 3 years ago

ktrns commented 3 years ago

Fixed scatter plots for DEGs
Fixed cellxgene_export chunk
Export Loupe only if all datasets are of type 10x
Fixed RunIntegration for param$norm="SCT"
Added todo chunk to not miss what is missing in the output chunk