Open linda5mith opened 2 years ago
Seems the code as is cannot handle pyrodigal unknown AA prediction denoted as 'X'. Will try look into this!
yes, this is fixed in the GitHub version. We will later push into pip too.
For now you can install it with
pip install git+https://github.com/ku-cbd/PhageBoost
Full traceback:
PhageBoost -f /data/san/data0/users/linda/databases/release202/fastani/database/GCA/000/007/325/GCA_000007325.1_genomic.fna.gz -o results