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CoreDNS issue with minikube when using podman rootless driver #18978

Open loungerider opened 4 months ago

loungerider commented 4 months ago

What Happened?

Tested on macOS Sonoma 14.4.1 Darwin Kernel Version 23.4.0 x86_64

minikube start --addons=ingress --driver=podman --container-runtime=containerd

minikube v1.33.1 on Darwin 14.4.1

Followed the directions at https://kubernetes.io/docs/tasks/access-application-cluster/ingress-minikube/ and it works with podman in rootful mode. When using the podman driver in rootless mode accessing the ingress through minikube tunnel will timeout. It seems that DNS in the ingress-nginx-controller pod is not working which causes nginx to return a 504 timeout.

k exec -it pod/ingress-nginx-controller-768f948f8f-dgj8g -n ingress-nginx -- /bin/bash
ingress-nginx-controller-768f948f8f-dgj8g:/etc/nginx$ cat /etc/resolv.conf
search ingress-nginx.svc.cluster.local svc.cluster.local cluster.local dns.podman
nameserver 10.96.0.10
options ndots:5
ingress-nginx-controller-768f948f8f-dgj8g:/etc/nginx$ nslookup kubernetes.default.svc.cluster.local
;; connection timed out; no servers could be reached

Also tested using a busybox pod and found the same DNS issue.

CoreDNS logs when running in rootless mode

k logs coredns-7db6d8ff4d-wnq8g -n kube-system
.:53
[INFO] plugin/reload: Running configuration SHA512 = 0acd057f3a0f4709031c7dfc71869eb076b357e33cc3f9e8c7bbf24d03af38ef7635b34367a89d45adab17a5391a1c2d058603c581e1c5f4a21732bf72371934
CoreDNS-1.11.1
linux/amd64, go1.20.7, ae2bbc2
[INFO] 127.0.0.1:57034 - 5798 "HINFO IN 5078784625045588880.5657588632774814912. udp 57 false 512" - - 0 6.003962814s
[ERROR] plugin/errors: 2 5078784625045588880.5657588632774814912. HINFO: read udp 10.244.0.2:50533->192.168.49.1:53: i/o timeout
[INFO] 127.0.0.1:55865 - 43166 "HINFO IN 5078784625045588880.5657588632774814912. udp 57 false 512" - - 0 6.002597212s
[ERROR] plugin/errors: 2 5078784625045588880.5657588632774814912. HINFO: read udp 10.244.0.2:36520->192.168.49.1:53: i/o timeout
[INFO] 127.0.0.1:58431 - 18170 "HINFO IN 5078784625045588880.5657588632774814912. udp 57 false 512" - - 0 4.00176304s
[ERROR] plugin/errors: 2 5078784625045588880.5657588632774814912. HINFO: read udp 10.244.0.2:37051->192.168.49.1:53: i/o timeout
[INFO] 127.0.0.1:38790 - 57209 "HINFO IN 5078784625045588880.5657588632774814912. udp 57 false 512" - - 0 2.001476848s
[ERROR] plugin/errors: 2 5078784625045588880.5657588632774814912. HINFO: read udp 10.244.0.2:52216->192.168.49.1:53: i/o timeout
[INFO] 127.0.0.1:40645 - 34316 "HINFO IN 5078784625045588880.5657588632774814912. udp 57 false 512" - - 0 2.000348752s
[ERROR] plugin/errors: 2 5078784625045588880.5657588632774814912. HINFO: read udp 10.244.0.2:36570->192.168.49.1:53: i/o timeout
[INFO] 127.0.0.1:53601 - 57548 "HINFO IN 5078784625045588880.5657588632774814912. udp 57 false 512" - - 0 2.000684865s

CoreDNS logs when running in rootful mode - working 

 k logs coredns-7db6d8ff4d-b5xkh -n kube-system
.:53
[INFO] plugin/reload: Running configuration SHA512 = 591cf328cccc12bc490481273e738df59329c62c0b729d94e8b61db9961c2fa5f046dd37f1cf888b953814040d180f52594972691cd6ff41be96639138a43908
CoreDNS-1.11.1
linux/amd64, go1.20.7, ae2bbc2

Attach the log file

log.txt

Operating System

macOS (Default)

Driver

Podman

viplifes commented 3 months ago

I have the same problem

viplifes commented 3 months ago

Restarting minikube helped me. This error is reproduced consistently after the first launch.


minikube delete --all

minikube start --driver=podman --container-runtime=containerd
😄  minikube v1.33.1 on Darwin 14.5 (arm64)
✨  Using the podman (experimental) driver based on user configuration
📌  Using rootless Podman driver
👍  Starting "minikube" primary control-plane node in "minikube" cluster
🚜  Pulling base image v0.0.44 ...
E0619 16:56:32.427322   71545 cache.go:189] Error downloading kic artifacts:  not yet implemented, see issue #8426
🔥  Creating podman container (CPUs=2, Memory=4000MB) ...
📦  Preparing Kubernetes v1.30.0 on containerd 1.6.31 ...
    ▪ Generating certificates and keys ...
    ▪ Booting up control plane ...
    ▪ Configuring RBAC rules ...
🔗  Configuring CNI (Container Networking Interface) ...
🔎  Verifying Kubernetes components...
    ▪ Using image gcr.io/k8s-minikube/storage-provisioner:v5
🌟  Enabled addons: storage-provisioner, default-storageclass
🏄  Done! kubectl is now configured to use "minikube" cluster and "default" namespace by default

minikube kubectl -- logs coredns-7db6d8ff4d-s9x75 -n kube-system
.:53
[INFO] plugin/reload: Running configuration SHA512 = 0acd057f3a0f4709031c7dfc71869eb076b357e33cc3f9e8c7bbf24d03af38ef7635b34367a89d45adab17a5391a1c2d058603c581e1c5f4a21732bf72371934
CoreDNS-1.11.1
linux/arm64, go1.20.7, ae2bbc2
[INFO] 127.0.0.1:38019 - 24897 "HINFO IN 1096134471684580472.5056541865665957661. udp 57 false 512" - - 0 6.003458595s
[ERROR] plugin/errors: 2 1096134471684580472.5056541865665957661. HINFO: read udp 10.244.0.2:59873->192.168.49.1:53: i/o timeout
[INFO] 127.0.0.1:42425 - 29487 "HINFO IN 1096134471684580472.5056541865665957661. udp 57 false 512" - - 0 6.004646058s
[ERROR] plugin/errors: 2 1096134471684580472.5056541865665957661. HINFO: read udp 10.244.0.2:59708->192.168.49.1:53: i/o timeout
[INFO] 127.0.0.1:33288 - 11391 "HINFO IN 1096134471684580472.5056541865665957661. udp 57 false 512" - - 0 4.004131918s

minikube stop
✋  Stopping node "minikube"  ...
🛑  Powering off "minikube" via SSH ...
🛑  1 node stopped.

minikube start --driver=podman --container-runtime=containerd
😄  minikube v1.33.1 on Darwin 14.5 (arm64)
✨  Using the podman (experimental) driver based on existing profile
👍  Starting "minikube" primary control-plane node in "minikube" cluster
🚜  Pulling base image v0.0.44 ...
E0619 16:58:38.405963   72269 cache.go:189] Error downloading kic artifacts:  not yet implemented, see issue #8426
🔄  Restarting existing podman container for "minikube" ...
📦  Preparing Kubernetes v1.30.0 on containerd 1.6.31 ...
🔎  Verifying Kubernetes components...
    ▪ Using image gcr.io/k8s-minikube/storage-provisioner:v5
🌟  Enabled addons: storage-provisioner, default-storageclass
🏄  Done! kubectl is now configured to use "minikube" cluster and "default" namespace by default

minikube kubectl -- logs coredns-7db6d8ff4d-s9x75 -n kube-system
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[INFO] plugin/kubernetes: waiting for Kubernetes API before starting server
[WARNING] plugin/kubernetes: starting server with unsynced Kubernetes API
.:53
[INFO] plugin/reload: Running configuration SHA512 = 0acd057f3a0f4709031c7dfc71869eb076b357e33cc3f9e8c7bbf24d03af38ef7635b34367a89d45adab17a5391a1c2d058603c581e1c5f4a21732bf72371934
CoreDNS-1.11.1
linux/arm64, go1.20.7, ae2bbc2
[INFO] 127.0.0.1:47118 - 59901 "HINFO IN 7265243234691078954.8742591653276844175. udp 57 false 512" NOERROR qr,rd,ra 57 0.004722185s

podman info

podman machine inspect
[
     {
          "ConfigDir": {
               "Path": "/Users/dimir/.config/containers/podman/machine/applehv"
          },
          "ConnectionInfo": {
               "PodmanSocket": {
                    "Path": "/var/folders/nr/c9zr4xxd6sxfcj2rq3z7vnb80000gn/T/podman/podman-machine-default-api.sock"
               },
               "PodmanPipe": null
          },
          "Created": "2024-06-19T16:43:23.711361+03:00",
          "LastUp": "0001-01-01T00:00:00Z",
          "Name": "podman-machine-default",
          "Resources": {
               "CPUs": 10,
               "DiskSize": 100,
               "Memory": 8192,
               "USBs": []
          },
          "SSHConfig": {
               "IdentityPath": "/Users/dimir/.local/share/containers/podman/machine/machine",
               "Port": 62360,
               "RemoteUsername": "core"
          },
          "State": "running",
          "UserModeNetworking": true,
          "Rootful": false,
          "Rosetta": true
     }
]

podman info
host:
  arch: arm64
  buildahVersion: 1.36.0
  cgroupControllers:
  - cpu
  - io
  - memory
  - pids
  cgroupManager: systemd
  cgroupVersion: v2
  conmon:
    package: conmon-2.1.10-1.fc40.aarch64
    path: /usr/bin/conmon
    version: 'conmon version 2.1.10, commit: '
  cpuUtilization:
    idlePercent: 95.55
    systemPercent: 2.03
    userPercent: 2.42
  cpus: 10
  databaseBackend: sqlite
  distribution:
    distribution: fedora
    variant: coreos
    version: "40"
  eventLogger: journald
  freeLocks: 2046
  hostname: localhost.localdomain
  idMappings:
    gidmap:
    - container_id: 0
      host_id: 1000
      size: 1
    - container_id: 1
      host_id: 100000
      size: 1000000
    uidmap:
    - container_id: 0
      host_id: 501
      size: 1
    - container_id: 1
      host_id: 100000
      size: 1000000
  kernel: 6.8.11-300.fc40.aarch64
  linkmode: dynamic
  logDriver: journald
  memFree: 5623390208
  memTotal: 8297472000
  networkBackend: netavark
  networkBackendInfo:
    backend: netavark
    dns:
      package: aardvark-dns-1.11.0-1.20240531102943328308.main.4.g6838c50.fc40.aarch64
      path: /usr/libexec/podman/aardvark-dns
      version: aardvark-dns 1.12.0-dev
    package: netavark-1.11.0-1.20240606174759319307.main.8.gfebe31a.fc40.aarch64
    path: /usr/libexec/podman/netavark
    version: netavark 1.12.0-dev
  ociRuntime:
    name: crun
    package: crun-1.15-1.20240607090105650503.main.32.gea54402.fc40.aarch64
    path: /usr/bin/crun
    version: |-
      crun version UNKNOWN
      commit: 7cfd0aeb40e4605b6b0ee0afd9cfca80f9c5f68a
      rundir: /run/user/501/crun
      spec: 1.0.0
      +SYSTEMD +SELINUX +APPARMOR +CAP +SECCOMP +EBPF +CRIU +LIBKRUN +WASM:wasmedge +YAJL
  os: linux
  pasta:
    executable: /usr/bin/pasta
    package: passt-0^20240510.g7288448-1.fc40.aarch64
    version: |
      pasta 0^20240510.g7288448-1.fc40.aarch64-pasta
      Copyright Red Hat
      GNU General Public License, version 2 or later
        <https://www.gnu.org/licenses/old-licenses/gpl-2.0.html>
      This is free software: you are free to change and redistribute it.
      There is NO WARRANTY, to the extent permitted by law.
  remoteSocket:
    exists: true
    path: /run/user/501/podman/podman.sock
  rootlessNetworkCmd: pasta
  security:
    apparmorEnabled: false
    capabilities: CAP_CHOWN,CAP_DAC_OVERRIDE,CAP_FOWNER,CAP_FSETID,CAP_KILL,CAP_NET_BIND_SERVICE,CAP_SETFCAP,CAP_SETGID,CAP_SETPCAP,CAP_SETUID,CAP_SYS_CHROOT
    rootless: true
    seccompEnabled: true
    seccompProfilePath: /usr/share/containers/seccomp.json
    selinuxEnabled: true
  serviceIsRemote: true
  slirp4netns:
    executable: /usr/bin/slirp4netns
    package: slirp4netns-1.2.2-2.fc40.aarch64
    version: |-
      slirp4netns version 1.2.2
      commit: 0ee2d87523e906518d34a6b423271e4826f71faf
      libslirp: 4.7.0
      SLIRP_CONFIG_VERSION_MAX: 4
      libseccomp: 2.5.3
  swapFree: 0
  swapTotal: 0
  uptime: 0h 18m 29.00s
  variant: v8
plugins:
  authorization: null
  log:
  - k8s-file
  - none
  - passthrough
  - journald
  network:
  - bridge
  - macvlan
  - ipvlan
  volume:
  - local
registries:
  search:
  - docker.io
store:
  configFile: /var/home/core/.config/containers/storage.conf
  containerStore:
    number: 1
    paused: 0
    running: 1
    stopped: 0
  graphDriverName: overlay
  graphOptions: {}
  graphRoot: /var/home/core/.local/share/containers/storage
  graphRootAllocated: 106769133568
  graphRootUsed: 6796795904
  graphStatus:
    Backing Filesystem: xfs
    Native Overlay Diff: "true"
    Supports d_type: "true"
    Supports shifting: "false"
    Supports volatile: "true"
    Using metacopy: "false"
  imageCopyTmpDir: /var/tmp
  imageStore:
    number: 1
  runRoot: /run/user/501/containers
  transientStore: false
  volumePath: /var/home/core/.local/share/containers/storage/volumes
version:
  APIVersion: 5.1.1
  Built: 1717459200
  BuiltTime: Tue Jun  4 03:00:00 2024
  GitCommit: ""
  GoVersion: go1.22.3
  Os: linux
  OsArch: linux/arm64
  Version: 5.1.1
dymurray commented 2 months ago

I am seeing the same thing on Fedora 39. Minikube v1.33.1.