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kundajelab / DMSO

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TODO for paper #3 Main summary figure (i.e. Figure 1) #12

Open annashcherbina opened 6 years ago

annashcherbina commented 6 years ago

20171031_094556

^ general outline of what to include in figure

annashcherbina commented 6 years ago

Venn Diagram "replacement" with UpSetR package

differential peaks

upsetr diffpeaks abs

split by up vs down

upsetr diffpeaks

differential genes

upsetr genes absval

spit by up vs down

upsetr diffgenes

akundaje commented 6 years ago

Nice

On Nov 14, 2017 6:10 PM, "annashcherbina" notifications@github.com wrote:

Venn Diagram "replacement" with UpSetR package differential peaks

[image: upsetr diffpeaks abs] https://user-images.githubusercontent.com/5261545/32815102-1bc6e2f8-c967-11e7-8543-7cc030762cc6.png split by up vs down

[image: upsetr diffpeaks] https://user-images.githubusercontent.com/5261545/32815099-1918bca2-c967-11e7-8d49-f73684405ae1.png differential genes

[image: upsetr genes absval] https://user-images.githubusercontent.com/5261545/32815085-0c1d7ad8-c967-11e7-92f5-c945b9b1658e.png spit by up vs down

[image: upsetr diffgenes] https://user-images.githubusercontent.com/5261545/32815084-092259fc-c967-11e7-8ba5-0e0baa8af06b.png

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