Does the official BDS work now instead of the patched one?

kundajelab / atac_dnase_pipelines

ATAC-seq and DNase-seq processing pipeline

BSD 3-Clause "New" or "Revised" License

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Does the official BDS work now instead of the patched one? #88

Closed ghuls closed 6 years ago

ghuls commented 6 years ago

In the manual:

Install BigDataScript v0.99999e (forked) on your system. The original BDS v0.99999e does not work correctly with the pipeline (see PR #142 and issue #131).

When following the PR, it seems that the problem should have been fixed in recent versions of BDS.

leepc12 commented 6 years ago

No, Issue 131 still persists in the latest official BDS.