kundajelab / basepairmodels

MIT License
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shap_scores aren't compatible with non-bias models #30

Open mlweilert opened 2 years ago

mlweilert commented 2 years ago

Is there support for shap_scores.py that for models that don't contain a bias track? When setting up a model with no bias, there is only 1 sequence input, but the shap_scores script assumes that there are three model inputs. This means that usage of this CLI breaks the contribution generation after a model is trained.