Closed kanglizhu closed 2 years ago
Dear developers,
I want to predict all the potential CTCF-binding sites in the human genome. The input file is the chip-seq file from one cell line.
Using "bpnet export-bw", I got two bw files: the preds.neg.bw and preds.pos.bw .
Using "bpnet cwm-scan", i got one file "motif-instances.tsv".
I'm not sure which file is the exact file I needed. I would highly appreciate it if you could point me to the correct direction!
Thank you so much,
kangli zhu
Dear developers,
I want to predict all the potential CTCF-binding sites in the human genome. The input file is the chip-seq file from one cell line.
Using "bpnet export-bw", I got two bw files: the preds.neg.bw and preds.pos.bw .
Using "bpnet cwm-scan", i got one file "motif-instances.tsv".
I'm not sure which file is the exact file I needed. I would highly appreciate it if you could point me to the correct direction!
Thank you so much,
kangli zhu