Hi,
first of all thanks for the great method. I am trying to reimplement the BPNet tool using most of the code from this repository while adjusting a few things for my needs. For my case I want only the profile predictor, I wish to know what the exact expected inputs for BPnet so I can implement a datagenerator using Keras.utils.Sequence. To be precise, for every sample i guess the the x will be a one hot encoded sequence, what is the target (y)? Is this the bigwig signal for the corresponding onehot sequence?
Hi, first of all thanks for the great method. I am trying to reimplement the BPNet tool using most of the code from this repository while adjusting a few things for my needs. For my case I want only the profile predictor, I wish to know what the exact expected inputs for BPnet so I can implement a datagenerator using Keras.utils.Sequence. To be precise, for every sample i guess the the x will be a one hot encoded sequence, what is the target (y)? Is this the bigwig signal for the corresponding onehot sequence?
Thanks