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kundajelab / bpnet

Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them
http://bit.ly/bpnet-colab
MIT License
141 stars 33 forks source link

subset bed file to bed3. add intervals_format arg #5

Closed Avsecz closed 5 years ago

Avsecz commented 5 years ago

This adds invervals_format argument to bpnet_data. It ignores other columns than the first 3 by default. closes https://github.com/kundajelab/bpnet/issues/1

It also fixes the new error with gin-config=0.2.1