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kundajelab / chipseq_pipeline

AQUAS TF and histone ChIP-seq pipeline
BSD 3-Clause "New" or "Revised" License
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mm10 #49

Closed jloupe closed 5 years ago

jloupe commented 5 years ago

I tried installing the mm10 genome today and encountered issues retrieving data from http://mitra.stanford.edu/kundaje/genome_data/mm10/. I looked and it appears as though there is no more data here. Have the data for generating genome files been removed?

leepc12 commented 5 years ago

This pipeline is no longer maintained. Please use a new pipeline https://github.com/ENCODE-DCC/chip-seq-pipeline2.