kundajelab gecco-variants issues - Githubissues

kundajelab / gecco-variants

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GECCO multi-tasked models: Basset, Resnet, Battnet (re-posted from Slack to help keep track of this post in the future)

#9 annashcherbina opened 6 years ago
0
Investigation of difference in performance between randomly initialized and ENCODE-initialized models (gc-balanced negatives, 1 neg: 1 pos ratio)

#8 annashcherbina opened 6 years ago
1
Curriculum learning! Attempt # 1

#7 annashcherbina opened 6 years ago
2
Summary of classification model performance on Task V576 DNAse

#6 annashcherbina opened 6 years ago
22
Negative sets for model training

#5 annashcherbina opened 6 years ago
4
Histone-binding site labels

#4 annashcherbina opened 6 years ago
0
Input optimizations: Personal variants, global allele frequencies

#3 annashcherbina opened 6 years ago
1
Analysis approach: Train on subject variants inserted into the model rather than on reference sequence

#2 annashcherbina opened 6 years ago
5
Analysis approach: histone binding site flank ratios

#1 annashcherbina opened 6 years ago
0