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kusterlab / prosit

Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019" DOI 10.1038/s41592-019-0426-7
https://www.proteomicsdb.org/prosit/
Apache License 2.0
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Incorrect file extension in a Model iRT file on figshare #36

Closed jenkinsc11 closed 4 years ago

jenkinsc11 commented 4 years ago

I do not know if this is the correct place for this but in the readme, there is a link to the figshare where the models are depositied. In the model_irt_prediction folder, the model.yaml file should be model.yml.

image

This is indicated in line 9 of the model.py script. When the server tries to call the model, it says the model.yml does not exist. This is fixed by simply changing the file extension of the model file to model.yml from model.yaml

tkschmidt commented 4 years ago

Hey, could you submit a PR for the repository? Changing on Figshare will generate new links :/