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kwikteam / klustakwik2

Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures
BSD 3-Clause "New" or "Revised" License
31 stars 13 forks source link

output of phy #75

Open mozdas opened 5 years ago

mozdas commented 5 years ago

Hi Guys, Since klustaviewa is not working for me anymore, I switched to phy. You normally get kwik file to Klustvieawa, then do manual spike sorting, then your output is saved to a clue file in the same directory. But For phy I don't see a clue file or even a cvs file. It would be greatly appreciated if you could help urgently. Thank you :)

I copied part of phy.log I am not sure if this is the problem? /home/ozdas/Downloads/.phy/hybrid_10sec/main/0/new_cluster_id.json doesn't exist.

2019-02-23 17:48:55 [D] model:671 Enable waveform filter. 2019-02-23 17:48:55 [D] model:467 Loading traces: hybrid_10sec.dat 2019-02-23 17:48:55 [D] model:1067 Kwik file /home/ozdas/Downloads/hybrid_10sec.kwik loaded. 2019-02-23 17:48:55 [D] context:35 Create cache directory /home/ozdas/Downloads/.phy/hybrid_10sec/main/0. 2019-02-23 17:48:55 [D] context:56 Initialize joblib cache dir at /home/ozdas/Downloads/.phy/hybrid_10sec/main/0. 2019-02-23 17:48:55 [D] context:128 The file /home/ozdas/Downloads/.phy/hybrid_10sec/main/0/new_cluster_id.json doesn't exist. 2019-02-23 17:48:55 [D] config:46 Load config file /home/ozdas/.phy/phy_config.py. 2019-02-23 17:48:55 [D] gui:428 Load the GUI state from /home/ozdas/.phy/KwikGUI/state.json. 2019-02-23 17:48:55 [D] utils:51 Get box size for 32 points. 2019-02-23 17:48:56 [D] gui:171 Load the geometry state. 2019-02-23 17:49:00 [D] gui_component:393 Select clusters: 6. 2019-02-23 17:49:01 [D] gui_component:393 Select clusters: 4. 2019-02-23 17:49:05 [D] gui_component:393 Select clusters: 4. 2019-02-23 17:49:07 [I] gui_component:219 Change metadata_group for clusters 4 to good. 2019-02-23 17:49:07 [D] gui_component:462 Get next_cluster for 4: None. 2019-02-23 17:49:07 [D] gui_component:393 Select clusters: 6.

mozdas commented 5 years ago

And this is the error I get when I run QGtkStyle could not resolve GTK. Make sure you have installed the proper libraries.