kymata-atlas kymata-core issues

kymata-atlas / kymata-core

Core Kymata codebase, including statistical analysis and plotting tools

https://kymata.org

MIT License

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issues

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Running plotting with brain maps no longer works since move to kymata-core

#323 neukym opened 1 day ago
1
Refactor IPPM Plotter + Builder along with tests

#322 anirudh1666 closed 3 days ago
2
Can we make MRICron-style minimaps for sensor plots?

#321 caiw opened 4 days ago
0
Show only chosen sensors

#320 caiw closed 4 days ago
2
Option to plot top five channels

#319 caiw closed 4 days ago
0
Make saving of top-five-channels.pngs optional

#318 caiw closed 4 days ago
0
Replace nans in function contours

#317 caiw closed 4 days ago
0
Gridsearch fails silently when function contour contains NaNs

#316 caiw closed 4 days ago
0
Update data_cleansing.py

#315 young-x-skyee closed 5 days ago
0
Delete variables after use to keep memory requirements down for gridsearch

#314 young-x-skyee opened 5 days ago
0
Option to show only EEG or MEG channels using nkg plotting

#313 young-x-skyee closed 4 days ago
0
Set random seed for gridsearch

#312 young-x-skyee closed 6 days ago
2
Apply updates in the main to language branch 10/07/24

#311 young-x-skyee closed 1 week ago
0
Remove medial wall hexels in order to improve source localisations

#310 neukym closed 1 week ago
0
Ippm denoiser optimisations

#309 anirudh1666 closed 4 days ago
1
Bump certifi from 2024.2.2 to 2024.7.4

#308 dependabot[bot] closed 1 week ago
0
Update dataset4.1.yaml

#307 young-x-skyee closed 1 week ago
1
Calculating the inverse solution using the fusion method properly

#306 young-x-skyee closed 5 days ago
2
CI: publish as a package

#305 caiw opened 2 weeks ago
0
Decide on a version-numbering scheme

#304 caiw opened 2 weeks ago
0
"top 5 channels" figures from gridsearch are sometimes empty

#303 caiw opened 2 weeks ago
1
The signature of `load_single_emeg` is very convoluted

#302 caiw opened 3 weeks ago
0
Bugfix: mismatched dimensions error when running gridsearch

#301 caiw closed 3 weeks ago
0
Source-space gridsearch fails on dataset 3.0

#300 caiw closed 3 weeks ago
0
Merge features from main and Tianyi's working branch, featuring language analysis

#299 young-x-skyee closed 1 week ago
0
Bump urllib3 from 2.2.1 to 2.2.2

#298 dependabot[bot] closed 4 weeks ago
0
Should we change gridsearch downsample default?

#297 neukym opened 4 weeks ago
1
Delete `3_trialwise_sensorspace_pre_290`

#296 neukym closed 4 weeks ago
0
Correct test & correction strategy for paused frames in the visual stream

#295 neukym opened 1 month ago
1
Moves 'kymata-toolbox-data' to 'kymata-core-data'

#294 neukym closed 3 weeks ago
0
Discuss `test_download_and_delete_fsaverage_surfaces()`

#293 neukym opened 1 month ago
2
Find correct `visual_delivery_shift_correction` for dataset 3

#292 caiw closed 1 month ago
2
Fill in correct values for stimulus drift and shift corrections

#291 caiw closed 1 month ago
4
Apply stimulus shift and latency correction inside gridsearch, not in the preprocessing steps

#290 caiw closed 4 weeks ago
5
Preprocessing validation: for each repetition, check we have enough data to do the cutting

#289 caiw opened 1 month ago
0
Gridsearch params `--start-latency` and `--emeg-t-start` should be in seconds, no miliseconds

#288 caiw opened 1 month ago
0
KyCore can run on visual input stream

#287 caiw closed 4 weeks ago
0
Remove latency correction from `create_trialwise_data`

#286 caiw closed 4 weeks ago
0
Gridsearch should apply latency and drift correction for both audio and visual streams

#285 caiw closed 4 weeks ago
1
Data preprocessing: replace `audio_events` and `visual_events` with one single correctness check

#284 caiw closed 4 weeks ago
0
CI jobs not running on pull requests

#283 caiw closed 1 month ago
1
Add logging setup to all invokers

#282 caiw closed 1 month ago
1
Don't behave weirdly when supplying gridsearch filenames including `.nkg`

#281 caiw closed 1 month ago
0
Use `logging` module with timestamps rather than `print` when doing actual logging

#280 caiw closed 1 month ago
0
Gridsearch should do the 'if file exists' check immediately

#279 neukym opened 1 month ago
0
Bump tornado from 6.4 to 6.4.1

#278 dependabot[bot] closed 1 month ago
0
fix, shouldn't be transposed

#277 ollieparish closed 1 month ago
0
Gridsearch refactor - Step 1 - npy-ifying the inv-sols and morphmaps

#276 ollieparish closed 1 month ago
7
Gridsearch speedups TODO list

#275 ollieparish opened 1 month ago
1
Main bug fix

#274 young-x-skyee closed 1 month ago
1