Open HeisenbergCai opened 1 month ago
Does the process finish and output the result?
Does the process finish and output the result?
Only the results of some of the models are output
I think this may be due to that expression of some genes in your dataset are very low and could not be exactly grouped for coxph analysis like here described (https://stackoverflow.com/questions/52394828/coxph-ran-out-of-iterations-wont-converge-categorical-treatment-continuous)
I think this may be due to that expression of some genes in your dataset are very low and could not exactly grouped for coxph analysis like here described (https://stackoverflow.com/questions/52394828/coxph-ran-out-of-iterations-wont-converge-categorical-treatment-continuous)
Thanks for your reply. I`ll try it.
Hi,I am currently utilizing the Mime1 package for my bioinformatics research and have encountered an issue with the ML.Dev.Prog.Sig function. Specifically, the following code results in an error:
res <- ML.Dev.Prog.Sig(train_data = list_train_vali_Data$Dataset1, list_train_vali_Data = list_train_vali_Data, unicox.filter.for.candi = T, unicox_p_cutoff = 0.05, candidate_genes = genelist, mode = 'all', nodesize =5, seed = 123)
The error message returned is:
--- 10.Lasso + survival-SVM --- There were 50 or more warnings (use warnings() to see the first 50)
How can I solve this problem???