l-ramirez-lopez / resemble

resemble is an R package which implements functions dedicated to non-linear modelling of complex spectroscopy data
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Documentation: Lost braces in \itemize; meant \describe #50

Closed l-ramirez-lopez closed 9 months ago

l-ramirez-lopez commented 9 months ago

NOTES in CRAN:

Version: 2.2.2
Check: Rd files
Result: NOTE
  checkRd: (-1) dissimilarity.Rd:25-29: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:30-34: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:35-38: Lost braces
      35 | \item{\code{"pls"}}:{ Mahalanobis distance
         |                     ^
  checkRd: (-1) dissimilarity.Rd:39-43: Lost braces
      39 | \item{\code{"mpls"}}:{ Mahalanobis distance
         |                      ^
  checkRd: (-1) dissimilarity.Rd:44-45: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:46-47: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:48-49: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:50-51: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:78-87: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:88-92: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:93-97: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:98-104: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) dissimilarity.Rd:153: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) dissimilarity.Rd:154-162: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) dissimilarity.Rd:163-164: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process_cv.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process_cv.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) gaussian_process_cv.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) get_ith_local_neighbors.Rd:67-80: Lost braces
      67 | itemize{
         |        ^
  checkRd: (-1) ith_mbl_neighbor.Rd:45-58: Lost braces
      45 | itemize{
         |        ^
  checkRd: (-1) local_fit.Rd:58-61: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) local_fit.Rd:62-77: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) local_fit.Rd:78-99: Lost braces
      78 | \item{Gaussian process with dot product covariance (\code{local_fit_gpr):}{
         |                                                                           ^
  checkRd: (-1) mbl.Rd:63-67: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:68-72: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:73-76: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:77-78: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:79-80: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:81-82: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:83-84: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:122-131: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:132-136: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:137-141: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:142-147: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl.Rd:207: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:208-209: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:210-213: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:214-218: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:219: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:220-223: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:224-229: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:230-232: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:234: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:235-237: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:238-240: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:241-242: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:243-245: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:246-249: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:250-253: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:254-256: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:257: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:258-259: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:260-261: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:262-263: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:264-265: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:266-267: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:268-273: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:274-277: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:278-282: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:283: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:284: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:285-290: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:292: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl.Rd:293-294: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) mbl_control.Rd:73-80: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl_control.Rd:81-96: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) mbl_control.Rd:97-100: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) opls.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_cv_cpp.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_cv_cpp.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_cv_cpp.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_cv_cpp.Rd:70-72: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_cv_cpp.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_cv_cpp.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:62-63: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:66: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:69-72: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:73-74: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_for_projection.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:54-55: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_all.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_basics.Rd:51: Lost braces
      51 | In contrast to code{opls} function, this one does not compute unnecessary
         |                    ^
  checkRd: (-1) opls_get_basics.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_basics.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_basics.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_basics.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_get_basics.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_gs.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_gs.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_gs.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) opls_gs.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_diss.Rd:50-58: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_diss.Rd:59-63: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_diss.Rd:64-68: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_diss.Rd:69-75: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_diss.Rd:91-92: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_diss.Rd:93-94: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_diss.Rd:95: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_diss.Rd:96-97: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_diss.Rd:141-143: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_diss.Rd:144-147: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_diss.Rd:148-151: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_diss.Rd:152-155: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_diss.Rd:156-157: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:48-49: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_projection.Rd:50-51: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_projection.Rd:52: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_projection.Rd:53: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_projection.Rd:63-70: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_projection.Rd:71-75: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_projection.Rd:76-80: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_projection.Rd:81-87: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) ortho_projection.Rd:128-130: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:131-133: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:134-137: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:138-139: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:140-142: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:143-156: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:157-158: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:159-161: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:162-170: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) ortho_projection.Rd:171: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) pca_nipals.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) pca_nipals.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) pca_nipals.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) pca_nipals.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) search_neighbors.Rd:27-31: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:32-37: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:38-41: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:42-46: Lost braces
      42 | \item{\code{"mpls"}}:{ Mahalanobis distance
         |                      ^
  checkRd: (-1) search_neighbors.Rd:47-48: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:49-50: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:51-52: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:53-54: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:94-102: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:103-107: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:108-112: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:113-118: Lost braces in \itemize; meant \describe ?
  checkRd: (-1) search_neighbors.Rd:166-170: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) search_neighbors.Rd:171-174: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) search_neighbors.Rd:175-179: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) search_neighbors.Rd:180-187: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) search_neighbors.Rd:188-190: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) search_neighbors.Rd:191-198: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) sid.Rd:69-74: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) sid.Rd:75-76: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) sid.Rd:77-78: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) sid.Rd:79-80: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) sid.Rd:81-82: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) sim_eval.Rd:27-28: Lost braces in \itemize; \value handles \item{}{} directly
  checkRd: (-1) sim_eval.Rd:29-32: Lost braces in \itemize; \value handles \item{}{} directly
l-ramirez-lopez commented 9 months ago

fixed